UGENE: Integrated Bioinformatics ToolsMain features:Multiple sequence alignment using MUSCLE 3,4 and KAlign;HMM profiles build and search, based on the source of HMMER 2 and HMMER 3;PCR Primers design using Primer 3;Protein secondary structure prediction using GOR IV and PSIPRED;Phylogenetic analysis with Phylip;Search for restriction enzymes and integration with REBASE;Extremely fast repeat finder;Search for trans cription factor binding sites using SITECON;Protein back translation;ORF finder;Complete SmithWaterman algorithm implementation.
综合生物信息学工具软件
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